Course

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Last Updated December 13th, 2012

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Syllabus

(Last Updated: Nov 10)

     
   

We will use two texts:

Discovering Statistics Using SPSS, 3rd ed, 2009, Andy Field, Sage Publications, Thousand Oaks

ISBN 978-1-84787-906-6

 

 

A Primer of Ecological Statistics, 2004, Nicholas Gotelli and Aaron Ellison, Sinauer Associates Inc., Sunderland

ISBN: 0878932690

 

 

Course Readings

The PDFs posted on this page are for class use only.

Please do not distribute.

 

 

Week 1 - Course Introduction and Foundations

Task for this Week: Review Basics & Check Out SPSS

 

Lecture 1: Tuesday Sept. 4

 

Introduction - Three Statistical Frameworks

 

 

Lecture 2: Thursday Sept. 6

 

 

The Scientific Method & Hypothesis Testing

 

 

Assigned Reading:

Platt J.R. (1964)

Strong inference. Science, 146: 347-353

Assigned Reading:

Quinn J.F., Dunham A.E. (1983)

On hypothesis testing in ecology and evolution. The American Naturalist, 122(5): 602-617

 

(PDF, 2 Mb)

Extra Reading:

O'Donohue, W., Buchanan, J.A. (2001)

The weaknesses of strong inference. Behavior & Philosophy, 29: 1-20

 

 

Week 2 - Simple Probability

Task for this Week: Calculate Simple Probability

 

 

Lecture 3: Tuesday Sept. 11

 

 

Probability and Sampling

 

 

Assigned Reading:

Diamond, J. (1988).
Why cats have nine lives.
Nature 332 (6165): 586–587.

Extra Reading:

Lewison, R.L., Soykan, C.U., Franklin J. (2009).
Mapping the bycatch seascape: multispecies and
multi-scale spatial patterns of fisheries bycatch.
Ecological Applications 19(4): 920–930.

 

(543 Kb)

 

 

Lecture 4: Thursday Sept. 13

 


Estimation - central tendency and variation

 

Week 3 - Probability Distributions

Task for this Week: Work with Probability Distributions

 

 

Lecture 5: Tuesday Sept. 18

 

Statistical Inference and Reliability

 

Extra Reading:

Fairfield-Walsh, C. Garrison, L. 2007. Estimated Bycatch of Marine Mammals and Turtles in the U.S. Atlantic Pelagic Longline Fleet During 2006. NOAA Technical Memorandum NOAA NMFS-SEFSC-560: 54 p.

(883 Kb)

 

 

 

Lecture 6: Thursday Sept. 20

 

Probability Distributions

 

Week 4 - SPSS & Probability Distributions

Task for this Week: Start Using SPSS

 

 

Lecture 7: Tuesday Sept. 25

 

Finish Discussing Probability Distributions

 

Review: Hw#1

Review: Quizz #1

 

 

 

 

Lecture 8: Thursday Sept. 27

 

SPSS - The Graphical Environment

 

Week 5 - Parametric Assumptions

Task for this Week: Assumptions and Data Transformations

 

 

Lecture 9: Tuesday Oct. 2

 

Statistical Assumptions

 

 
 

Lecture 10: Thursday Oct. 4

 

Data Transformations

 

 

Week 6 - Assessing Normality

Task for this Week: Assessing Data Normality

 

 

Lecture 11: Tuesday Oct. 9

 

Distributions and descriptive statistics

 

 
 
 

Lecture 12: Thursday Oct. 11

 

Dealing with the lack of Normality - Theory & Practice

 

 

Week 7 - Using Statistical Models to Test Hypotheses

Task for this Week: Start Exploring Statistical Models

 

 

Lecture 13: Tuesday Oct. 16

 

Statistical Modelling & Hypothesis Testing

 

 
 

Lecture 14: Thursday Oct. 18

 

Correlation

 

 

Week 8 - Regression

Task for this Week: Explore Linear Regression

 

 

Lecture 15: Tuesday Oct. 23

 

Simple Linear Regression

 

 
 

Lecture 16: Thursday Oct. 25

 

Multiple Linear Regression

 

 

Week 9 - Comparing Two (or more) Means

Task for this Week: Explore T tests and ANOVA

 

 

Lecture 17: Tuesday Oct. 30

 

Comparing two means

 

 
 

Lecture 18: Thursday Nov. 1

 

Analysis of Variance, Planned Comparisons

 

 

Week 10 - Comparing Two (or more) Means


Task for this Week: Continue Exploring ANOVA

 

 

Lecture 18 (finish): Tuesday Nov. 6

 

Analysis of Variance, Planned Comparisons

 

 

 

Lecture 19: Thursday Nov. 8

 

Analysis of Variance, Extensions

 

 

Week 11 - Multi-way ANOVA

Task for this Week: Continue Exploring ANOVA

 

 

Lecture 20 : Tuesday Nov. 13

 

Repeated Measures ANOVA

 

 

Lecture 21: Thursday Nov. 15

 

Factorial (and Nested) ANOVA

 

Week 12 - Mixed-model ANOVA

Task for this Week: Finish Exploring ANOVA

 

 

Lecture 22 : Tuesday Nov. 20

 

Mixed-model ANOVA

 

Thursday Nov. 22

 

NO CLASS - Thanksgivings

 

 

Week 13 - Other Applications

Task for this Week: Explore Other Applications

 

 

Lecture 23 : Tuesday Nov. 27

 

Contingency Tests

 

Lecture 24 : Thursday Nov. 29

 

Nonparametric tests

 

 

Week 14 - Wrap-Up

Task for this Week: Explore Other Applications

 

 

Lecture 25 : Tuesday Dec. 4

 

Statistical Power

 

Extra Reading:

Dayton, P.K. (1998) Reversal of the burden of proof in fisheries management. Science 279 (5352): 821-822.

(655 Kb)

 

Lecture 25 : Thursday Dec. 6

 

Jeopardy

 

 

 

 

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